Index

_

__array__() (pygetm.core.Array method) __bool__() (pygetm.parallel.Tiling method) __call__() (pygetm.airsea.Base method) (pygetm.airsea.FluxesFromMeteo method) (pygetm.core.Locator method) (pygetm.internal_pressure.Base method) (pygetm.parallel.GatherFromIndices method) (pygetm.parallel.HaloUpdater method) (pygetm.radiation.Radiation method) (pygetm.radiation.TwoBand method) (pygetm.vertical_coordinates.PerGrid method)

__getitem__() (pygetm.core.Array method) __setitem__() (pygetm.core.Array method)

A

ACTIVE (pygetm.constants.CellType attribute) Adaptive (class in pygetm.vertical_coordinates) add() (pygetm.input.InputManager method) (pygetm.tracer.TracerCollection method) add_bottom_boundary() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) add_by_index() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) (pygetm.rivers.GlobalRiverCollection method) add_by_location() (pygetm.rivers.GlobalRiverCollection method) add_coordinates() (pygetm.output.operators.FieldCollection method) add_density() (in module pygetm.input.glodap) add_freshwater_inputs() (pygetm.simulation.Simulation method) add_left_boundary() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) add_netcdf_file() (pygetm.output.OutputManager method) add_recorder() (pygetm.output.OutputManager method) add_recv() (pygetm.parallel.HaloUpdater method) add_relaxation() (pygetm.open_boundaries.ArrayOpenBoundaries method) add_restart() (pygetm.output.OutputManager method) add_right_boundary() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) add_send() (pygetm.parallel.HaloUpdater method) add_top_boundary() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) add_vertical_movement_to_sources() (pygetm.fabm.FABM method) add_zarr_group() (pygetm.output.OutputManager method) adjust_mask() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) advance() (pygetm.fabm.FABM method) (pygetm.momentum.Momentum method) (pygetm.simulation.BaseSimulation method) (pygetm.tracer.TracerCollection method) (pygetm.vertical_mixing.GOTM method) (pygetm.vertical_mixing.VerticalMixing method) advance_3d_transport() (pygetm.momentum.Momentum method) advance_depth_integrated() (pygetm.momentum.Momentum method) advance_surface_elevation() (pygetm.simulation.Simulation method) Advection (class in pygetm.operators) advection_scheme (pygetm.momentum.Momentum attribute) advection_split_2d (pygetm.momentum.Momentum attribute) AdvectionScheme (class in pygetm.operators) AdvectionSplit (class in pygetm.operators) advpk (pygetm.momentum.Momentum attribute) advqk (pygetm.momentum.Momentum attribute) advU (pygetm.momentum.Momentum attribute)

advV (pygetm.momentum.Momentum attribute) airsea (pygetm.simulation.Simulation attribute) airsea_halo_update (pygetm.simulation.Simulation attribute) ALL (pygetm.input.OnGrid attribute) (pygetm.parallel.Neighbor attribute) all_mask (pygetm.core.Array property) all_reqs (pygetm.parallel.HaloUpdater attribute) all_shape (pygetm.core.Array property) allgather() (pygetm.core.Array method) allreduce() (pygetm.parallel.Tiling method) alpha (pygetm.core.Grid property) ALWAYS (pygetm.output.operators.Updatable attribute) An (pygetm.momentum.Momentum attribute) An_uu (pygetm.momentum.Momentum attribute) An_uv (pygetm.momentum.Momentum attribute) An_vu (pygetm.momentum.Momentum attribute) An_vv (pygetm.momentum.Momentum attribute) apply() (pygetm.density.LazyConvert method) (pygetm.input.Operator method) (pygetm.input.UFunc method) (pygetm.input.VerticalInterpolation method) (pygetm.input.Wrap method) apply_3d() (pygetm.operators.Advection method) apply_3d_batch() (pygetm.operators.Advection method) apply_bottom_friction (pygetm.momentum.Momentum attribute) apply_on_root_and_bcast() (in module pygetm.domain) apply_only_on_root() (in module pygetm.domain) area (pygetm.core.Grid property) (pygetm.domain.Domain property) Array (class in pygetm.core) array (pygetm.output.operators.Field attribute) (pygetm.tracer.TracerTotal attribute) array() (pygetm.core.Grid method) ArrayOpenBoundaries (class in pygetm.open_boundaries) ArrayOpenBoundary (class in pygetm.open_boundaries) as_xarray() (pygetm.core.Array method) astype() (pygetm.input.LazyArray method) attrs (pygetm.core.Array attribute) (pygetm.output.operators.Base attribute) autodetect() (pygetm.parallel.Tiling static method) avmmol (pygetm.momentum.Momentum attribute)

B

BAROCLINIC (pygetm.constants.RunType attribute) BAROTROPIC_2D (pygetm.constants.RunType attribute) BAROTROPIC_3D (pygetm.constants.RunType attribute) Base (class in pygetm.airsea) (class in pygetm.ice) (class in pygetm.internal_pressure) (class in pygetm.output.operators) (class in pygetm.vertical_coordinates) BaseHaloUpdater (class in pygetm.parallel)

BaseSimulation (class in pygetm.simulation) BlumbergMellor (class in pygetm.internal_pressure) BOTTOM (pygetm.parallel.Neighbor attribute) bottom_friction() (pygetm.momentum.Momentum method) bottom_indices (pygetm.core.Grid attribute) BOTTOMLEFT (pygetm.parallel.Neighbor attribute) BOTTOMRIGHT (pygetm.parallel.Neighbor attribute) BOUNDARY (pygetm.constants.CellType attribute) BoundaryCondition (class in pygetm.open_boundaries) buoy (pygetm.simulation.Simulation attribute)

C

Cache (class in pygetm.input) calculate_sigma() (in module pygetm.vertical_coordinates) CellType (class in pygetm.constants) centers_to_supergrid_1d() (in module pygetm.domain) centers_to_supergrid_2d() (in module pygetm.domain) cfl_check() (pygetm.domain.Domain method) check_equal() (in module pygetm.debug) check_finite() (in module pygetm.debug) (pygetm.simulation.BaseSimulation method) check_range() (in module pygetm.debug) check_zero() (in module pygetm.debug) CLAMP (pygetm.constants.EdgeTreatment attribute) Clamped (class in pygetm.open_boundaries) clear() (pygetm.open_boundaries.GlobalOpenBoundaryCollection method) climatology (pygetm.input.TemporalInterpolation attribute) close() (pygetm.output.File method) (pygetm.output.OutputManager method) close_flux_interfaces() (pygetm.core.Grid method) close_now() (pygetm.output.File method) (pygetm.output.memory.MemoryFile method) (pygetm.output.netcdf.NetCDFFile method) cnpar (pygetm.momentum.Momentum attribute) collection (pygetm.output.operators.Field attribute) compare() (in module pygetm.util.compare_nc) (pygetm.parallel.HaloUpdater method) compare_at_time() (in module pygetm.util.compare_nc) compare_command() (in module pygetm.util.compare_nc) compare_halos() (pygetm.core.Array method) Concatenate (class in pygetm.input) concatenate_slices() (in module pygetm.input) configure_chunking_and_compression() (in module pygetm.input.util) contains() (pygetm.domain.Domain method)

convert() (in module pygetm.input.woa) convert_ts() (in module pygetm.input.util.convert_ts) (pygetm.density.Density static method) coordinates (pygetm.input.GETMAccessor property) (pygetm.output.operators.Base attribute) CoordinateType (class in pygetm.constants) coords (pygetm.output.operators.Base property) (pygetm.output.operators.Gather property) (pygetm.output.operators.IndexXY property) (pygetm.output.operators.InterpZ property) (pygetm.output.operators.TimeAverage property) (pygetm.output.operators.UnivariateTransform property) (pygetm.output.operators.WrappedArray property) copy_variable() (in module pygetm.util.nctools) cor (pygetm.core.Grid property) coriolis() (in module pygetm.domain) (pygetm.momentum.Momentum method) coriolis_scheme (pygetm.momentum.Momentum attribute) CoriolisScheme (class in pygetm.momentum) corpk (pygetm.momentum.Momentum attribute) corqk (pygetm.momentum.Momentum attribute) corU (pygetm.momentum.Momentum attribute) corV (pygetm.momentum.Momentum attribute) CP (pygetm.density.Density attribute) CPA (in module pygetm.airsea) create() (pygetm.core.Array static method) create_array() (pygetm.core.Grid method) create_cartesian() (in module pygetm.domain) create_grids() (pygetm.domain.Domain method) create_halo_updaters() (in module pygetm.parallel) create_spherical() (in module pygetm.domain) create_spherical_at_resolution() (in module pygetm.domain) create_tiling() (pygetm.domain.Domain method)

D

D (pygetm.core.Grid property) D_halo_update (pygetm.simulation.Simulation attribute) dampU (pygetm.momentum.Momentum attribute) dampV (pygetm.momentum.Momentum attribute) Data (class in pygetm.input.tpxo) DatFile (class in pygetm.legacy) DAYS (pygetm.output.TimeUnit attribute) Dclip (pygetm.core.Grid attribute) Dcrit (pygetm.simulation.Simulation attribute) debug_nc_reads() (in module pygetm.input) (pygetm.input.InputManager method) DEFAULT (pygetm.momentum.CoriolisScheme attribute) (pygetm.operators.AdvectionScheme attribute) default_name (pygetm.output.operators.Base property) (pygetm.output.operators.Field property) (pygetm.output.operators.TimeAverage property) (pygetm.output.operators.UnivariateTransform property) (pygetm.output.operators.WrappedArray property) default_output_transforms (pygetm.core.Grid attribute) default_outputs (pygetm.fabm.FABM property) default_time_reference (pygetm.simulation.BaseSimulation attribute) delay_slow_ip (pygetm.simulation.Simulation attribute) Density (class in pygetm.density) density (pygetm.simulation.Simulation attribute) depth (pygetm.simulation.Simulation attribute) describe() (pygetm.parallel.Tiling method)

diffpk (pygetm.momentum.Momentum attribute) diffqk (pygetm.momentum.Momentum attribute) diffU (pygetm.momentum.Momentum attribute) diffuse_momentum (pygetm.momentum.Momentum attribute) diffV (pygetm.momentum.Momentum attribute) dims (pygetm.output.operators.Base attribute) DistanceFromBottom (pygetm.rivers.VerticalPosition attribute) DistanceFromSurface (pygetm.rivers.VerticalPosition attribute) Dmin (pygetm.simulation.Simulation attribute) Domain (class in pygetm.domain) domain_from_topo() (in module pygetm.legacy) download() (in module pygetm.input.glodap) download_and_process() (in module pygetm.input.glodap) download_era5() (in module pygetm.input.igotm) dpdx (pygetm.simulation.Simulation attribute) dpdxo (pygetm.simulation.Simulation attribute) dpdy (pygetm.simulation.Simulation attribute) dpdyo (pygetm.simulation.Simulation attribute) dtype (pygetm.core.Array property) (pygetm.output.operators.Base attribute) dump() (pygetm.output.OutputManager method) (pygetm.parallel.Tiling method) dx (pygetm.core.Grid property) (pygetm.domain.Domain property) dy (pygetm.core.Grid property) (pygetm.domain.Domain property)

E

ea2 (pygetm.momentum.Momentum attribute) ea4 (pygetm.momentum.Momentum attribute) EAST (pygetm.open_boundaries.Side attribute) EDGE_X (pygetm.constants.CellType attribute) EDGE_Y (pygetm.constants.CellType attribute) edges (pygetm.output.operators.InterpZ attribute) EdgeTreatment (class in pygetm.constants) Ekin (pygetm.simulation.Simulation property)

ESPELID (pygetm.momentum.CoriolisScheme attribute) expand_2d() (in module pygetm.domain) expression (pygetm.output.operators.Base attribute) extra_output_coordinates (pygetm.core.Grid attribute) extract_inward() (pygetm.open_boundaries.LocalOpenBoundary method) extract_rectangle() (pygetm.domain.Domain method) extract_uv_in() (pygetm.open_boundaries.LocalOpenBoundary method) EXTRAPOLATE (pygetm.constants.EdgeTreatment attribute) EXTRAPOLATE_PERIODIC (pygetm.constants.EdgeTreatment attribute)

F

f (pygetm.domain.Domain property) FABM (class in pygetm.fabm) fabm (pygetm.simulation.Simulation attribute) fabm_standard_name (pygetm.core.Array property) Field (class in pygetm.output.operators) FieldCollection (class in pygetm.output.operators) fields (pygetm.core.Grid attribute) File (class in pygetm.output) fill() (in module pygetm.input.glodap) (in module pygetm.input.woa) (pygetm.core.Array method) fill_value (pygetm.core.Array property) (pygetm.output.operators.Base attribute) Filler (class in pygetm.util.fill) find_all_optimal_divisons() (in module pygetm.parallel) find_optimal_divison() (in module pygetm.parallel)

finish() (pygetm.parallel.BaseHaloUpdater method) (pygetm.parallel.HaloUpdater method) (pygetm.simulation.BaseSimulation method) finish_initialization() (pygetm.core.Array method) flag_prescribed_tracers() (pygetm.rivers.LocalRiverCollection method) Flather (class in pygetm.open_boundaries) Fluxes (class in pygetm.airsea) FluxesFromMeteo (class in pygetm.airsea) follow_target_cell (pygetm.rivers.RiverTracer property) freeze() (pygetm.core.Grid method) (pygetm.parallel.HaloUpdater method) from_nc() (in module pygetm.input) from_xarray() (in module pygetm.domain) FromTGrid (class in pygetm.vertical_coordinates) FROZEN_DENSITY (pygetm.constants.RunType attribute) FULL (pygetm.operators.AdvectionSplit attribute) fwf (pygetm.simulation.Simulation attribute)

G

Gather (class in pygetm.output.operators) (class in pygetm.parallel) gather() (pygetm.core.Array method) (pygetm.output.operators.Base method) (pygetm.output.operators.WrappedArray method) GatherFromIndices (class in pygetm.parallel) get() (in module pygetm.input.emodnet) (in module pygetm.input.tpxo) (pygetm.output.operators.Base method) (pygetm.output.operators.Field method) (pygetm.output.operators.Gather method) (pygetm.output.operators.IndexXY method) (pygetm.output.operators.InterpZ method) (pygetm.output.operators.Mask method) (pygetm.output.operators.Regrid method) (pygetm.output.operators.TimeAverage method) (pygetm.output.operators.UnivariateTransformWithData method) (pygetm.output.operators.WrappedArray method) get_active_part_of_layers() (pygetm.rivers.LocalRiverCollection method) get_buoyancy_frequency() (pygetm.density.Density static method) get_cf_time_attrs() (pygetm.output.File static method) get_coords() (pygetm.output.operators.GridInfo method) get_density() (pygetm.density.Density static method) get_dependency() (pygetm.fabm.FABM method) get_final_mask() (pygetm.domain.Domain method) get_gather_info() (pygetm.core.Grid method) get_line() (pygetm.legacy.DatFile method) get_logger() (in module pygetm.parallel) get_mask() (pygetm.core.Grid method) get_meteo() (in module pygetm.input.gotm) get_potential_temperature() (pygetm.density.Density static method)

get_profiles() (in module pygetm.input.gotm) get_rx0() (pygetm.domain.Domain method) get_setter() (pygetm.open_boundaries.BoundaryCondition static method) get_timeseries() (in module pygetm.input.gotm) get_updater() (pygetm.open_boundaries.BoundaryCondition method) (pygetm.open_boundaries.Clamped method) (pygetm.open_boundaries.Flather method) (pygetm.open_boundaries.Sponge method) (pygetm.open_boundaries.ZeroGradient method) GETMAccessor (class in pygetm.input) global_mean() (pygetm.core.Array method) global_sum() (pygetm.core.Array method) global_to_local() (pygetm.core.Grid method) GlobalOpenBoundaryCollection (class in pygetm.open_boundaries) GlobalRiver (class in pygetm.rivers) GlobalRiverCollection (class in pygetm.rivers) GOTM (class in pygetm.vertical_mixing) gradient_x() (pygetm.core.Array method) gradient_x_calculator (pygetm.core.Grid property) gradient_y() (pygetm.core.Array method) gradient_y_calculator (pygetm.core.Grid property) GRAVITY (in module pygetm.constants) Grid (class in pygetm.core) grid (pygetm.output.operators.GridInfo attribute) grid_info (pygetm.output.operators.Base property) (pygetm.output.operators.Field property) (pygetm.output.operators.Gather property) (pygetm.output.operators.IndexXY property) (pygetm.output.operators.Regrid property) (pygetm.output.operators.UnivariateTransform property) GridInfo (class in pygetm.output.operators) GVC (class in pygetm.vertical_coordinates)

H

H (pygetm.core.Grid property) (pygetm.domain.Domain property) HALF (pygetm.operators.AdvectionSplit attribute) HALF_ALWAYS (pygetm.operators.AdvectionSplit attribute) halo1 (pygetm.operators.Advection attribute) halo2 (pygetm.operators.Advection attribute) halo2name (pygetm.parallel.HaloUpdater attribute) halo_updaters (pygetm.core.Array attribute) HaloUpdater (class in pygetm.parallel) has_dependency() (pygetm.fabm.FABM method)

hhalf (pygetm.core.Grid attribute) hn (pygetm.core.Grid property) ho (pygetm.core.Grid attribute) HORIZONTAL (pygetm.input.OnGrid attribute) horizontal_coordinates (pygetm.core.Grid attribute) horizontal_interpolation() (in module pygetm.input) HorizontalInterpolation (class in pygetm.input) HOURS (pygetm.output.TimeUnit attribute) HSIMT (pygetm.operators.AdvectionScheme attribute) hU_bot (pygetm.momentum.Momentum attribute) hV_bot (pygetm.momentum.Momentum attribute)

I

i (pygetm.open_boundaries.GlobalOpenBoundaryCollection property) iarea (pygetm.core.Grid property) Ice (class in pygetm.ice) ice (pygetm.simulation.Simulation attribute) idpdx (pygetm.internal_pressure.Base attribute) idpdy (pygetm.internal_pressure.Base attribute) idx (pygetm.core.Grid property) idy (pygetm.core.Grid property) IJ (pygetm.constants.CoordinateType attribute) IndexXY (class in pygetm.output.operators) infer_water_contact() (pygetm.core.Grid method) initialize() (pygetm.airsea.Base method) (pygetm.airsea.Fluxes method) (pygetm.airsea.FluxesFromMeteo method) (pygetm.fabm.FABM method) (pygetm.ice.Base method) (pygetm.ice.Ice method) (pygetm.ice.Prescribed method) (pygetm.internal_pressure.Base method) (pygetm.internal_pressure.Prescribed method) (pygetm.momentum.Momentum method) (pygetm.open_boundaries.ArrayOpenBoundaries method) (pygetm.open_boundaries.BoundaryCondition method) (pygetm.open_boundaries.Sponge method) (pygetm.radiation.Radiation method) (pygetm.radiation.TwoBand method) (pygetm.rivers.GlobalRiverCollection method) (pygetm.vertical_coordinates.Adaptive method) (pygetm.vertical_coordinates.Base method) (pygetm.vertical_coordinates.GVC method) (pygetm.vertical_coordinates.PerGrid method) (pygetm.vertical_mixing.GOTM method) (pygetm.vertical_mixing.VerticalMixing method)

initialize_depth() (pygetm.simulation.Simulation method) input_grid_mappers (pygetm.core.Grid attribute) input_manager (pygetm.core.Grid attribute) (pygetm.simulation.BaseSimulation attribute) InputManager (class in pygetm.input) interfaces_to_supergrid_1d() (in module pygetm.domain) interfaces_to_supergrid_2d() (in module pygetm.domain) internal_pressure (pygetm.simulation.Simulation attribute) interp() (pygetm.core.Array method) interp_1d() (in module pygetm.util.interpolate) interpolate (pygetm.output.operators.Regrid attribute) interpolator() (pygetm.core.Grid method) InterpZ (class in pygetm.output.operators) ioffset (pygetm.core.Grid attribute) is_time_varying() (pygetm.input.LazyArray method) (pygetm.input.Operator method) (pygetm.input.TemporalInterpolation method) (pygetm.input.tpxo.Data method) isel() (in module pygetm.input) (pygetm.core.Array method) istep (pygetm.simulation.BaseSimulation attribute)

J

j (pygetm.open_boundaries.GlobalOpenBoundaryCollection property) Jerlov (class in pygetm.radiation)

jerlov_type (pygetm.radiation.TwoBand property) joffset (pygetm.core.Grid attribute)

L

lat (pygetm.core.Grid property) (pygetm.domain.Domain property) (pygetm.open_boundaries.GlobalOpenBoundaryCollection property) latitude (pygetm.input.GETMAccessor property) lazy_convert_ts() (pygetm.density.Density static method) LazyArray (class in pygetm.input) LazyConvert (class in pygetm.density) LEFT (pygetm.parallel.Neighbor attribute) LEFT_AND_RIGHT (pygetm.parallel.Neighbor attribute) LEFT_AND_RIGHT_AND_TOP_AND_BOTTOM (pygetm.parallel.Neighbor attribute) limit_region() (in module pygetm.input) limit_velocity_depth() (pygetm.domain.Domain method) Linear2DGridInterpolator (class in pygetm.util.interpolate) LinearVectorized1D (class in pygetm.util.interpolate) load() (in module pygetm.subdiv) (pygetm.parallel.Tiling static method) load_bdyinfo() (in module pygetm.legacy) load_restart() (pygetm.simulation.BaseSimulation method) load_riverinfo() (in module pygetm.legacy) load_topo() (in module pygetm.subdiv)

local (pygetm.open_boundaries.Relaxation attribute) local_to_global_indices (pygetm.open_boundaries.LocalOpenBoundaryCollection property) LocalOpenBoundary (class in pygetm.open_boundaries) LocalOpenBoundaryCollection (class in pygetm.open_boundaries) LocalRiver (class in pygetm.rivers) LocalRiverCollection (class in pygetm.rivers) locate() (pygetm.rivers.GlobalRiver method) Locator (class in pygetm.core) log_exceptions() (in module pygetm.simulation) log_range() (in module pygetm.debug) logger (pygetm.momentum.Momentum attribute) (pygetm.simulation.BaseSimulation attribute) (pygetm.vertical_coordinates.Base attribute) lon (pygetm.core.Grid property) (pygetm.domain.Domain property) (pygetm.open_boundaries.GlobalOpenBoundaryCollection property) long_name (pygetm.core.Array property) (pygetm.tracer.TracerTotal attribute) longitude (pygetm.input.GETMAccessor property) LONLAT (pygetm.constants.CoordinateType attribute)

M

ma (pygetm.core.Array property) MACRO (pygetm.constants.TimeVarying attribute) MACRO_ONLY (pygetm.output.operators.Updatable attribute) macrotimestep (pygetm.simulation.BaseSimulation attribute) main() (in module pygetm.subdiv) map_to_grid() (pygetm.rivers.GlobalRiverCollection method) Mask (class in pygetm.output.operators) mask (pygetm.core.Array property) (pygetm.core.Grid property) (pygetm.domain.Domain property) (pygetm.output.operators.Base property) (pygetm.output.operators.Field property) (pygetm.output.operators.IndexXY property) (pygetm.output.operators.InterpZ property) (pygetm.output.operators.Regrid property) (pygetm.output.operators.UnivariateTransform property) mask3d (pygetm.core.Grid attribute) mask_indices() (pygetm.domain.Domain method) mask_rectangle() (pygetm.domain.Domain method) mask_shallow() (pygetm.domain.Domain method) mask_subbasins() (pygetm.domain.Domain method) MAX_CACHE_SIZE (pygetm.input.TemporalInterpolation attribute) max_rx0 (pygetm.domain.Domain property) maxdt (pygetm.domain.Domain property) MemoryFile (class in pygetm.output.memory) MICRO (pygetm.constants.TimeVarying attribute) MINUTES (pygetm.output.TimeUnit attribute) mirror() (pygetm.core.Array method) MIRROR_EXT (pygetm.constants.CellType attribute) MIRROR_INT (pygetm.constants.CellType attribute) MISSING (pygetm.constants.EdgeTreatment attribute) module pygetm pygetm.airsea pygetm.constants pygetm.core pygetm.debug pygetm.density pygetm.domain pygetm.fabm pygetm.ice pygetm.input pygetm.input.emodnet pygetm.input.glodap pygetm.input.gotm pygetm.input.igotm pygetm.input.tpxo pygetm.input.util pygetm.input.util.convert_ts pygetm.input.woa pygetm.internal_pressure pygetm.legacy pygetm.momentum pygetm.open_boundaries pygetm.operators pygetm.output pygetm.output.memory pygetm.output.netcdf pygetm.output.operators pygetm.parallel pygetm.radiation pygetm.rivers pygetm.simulation pygetm.subdiv pygetm.tracer pygetm.util pygetm.util.compare_nc pygetm.util.fill pygetm.util.interpolate pygetm.util.nctools pygetm.vertical_coordinates pygetm.vertical_mixing

molecular_diffusivity (pygetm.tracer.Tracer attribute) Momentum (class in pygetm.momentum) momentum (pygetm.simulation.Simulation attribute) MONTHS (pygetm.output.TimeUnit attribute) mpi4py_autofree() (in module pygetm.parallel) MUSCL (pygetm.operators.AdvectionScheme attribute)

N

nactive (pygetm.parallel.Tiling property) name (pygetm.core.Array property) ndim (pygetm.core.Array property) (pygetm.output.operators.Base attribute) nearest_point() (pygetm.domain.Domain method) Neighbor (class in pygetm.parallel)

NetCDFFile (class in pygetm.output.netcdf) NN (pygetm.simulation.Simulation attribute) NONE (pygetm.input.OnGrid attribute) NORTH (pygetm.open_boundaries.Side attribute) NTIME_CACHE (pygetm.input.TemporalInterpolation attribute) nuh_ct (pygetm.simulation.Simulation attribute)

O

OFF (pygetm.momentum.CoriolisScheme attribute) offset (pygetm.tracer.TracerTotal attribute) on_boundary (pygetm.output.operators.GridInfo attribute) OnGrid (class in pygetm.input) open_boundaries (pygetm.core.Array attribute) (pygetm.core.Grid attribute) (pygetm.simulation.Simulation attribute) (pygetm.tracer.Tracer attribute)

OpenBoundary (class in pygetm.open_boundaries) Operator (class in pygetm.input) optimize() (in module pygetm.subdiv) output_manager (pygetm.simulation.BaseSimulation attribute) OutputManager (class in pygetm.output) overlap (pygetm.core.Grid attribute)

P

P2_PDM (pygetm.operators.AdvectionScheme attribute) par (pygetm.simulation.Simulation attribute) par0 (pygetm.simulation.Simulation attribute) parameterize() (pygetm.output.operators.Base class method) per_mass (pygetm.tracer.TracerTotal attribute) PerGrid (class in pygetm.vertical_coordinates) PERIODIC (pygetm.constants.EdgeTreatment attribute) pk (pygetm.momentum.Momentum attribute) plot() (pygetm.core.Array method) (pygetm.domain.Domain method) (pygetm.parallel.Tiling method) plot_2d() (in module pygetm.debug) postfix (pygetm.core.Grid attribute) precipitation_follows_target_cell (pygetm.tracer.Tracer attribute) prepare() (pygetm.open_boundaries.LocalOpenBoundaryCollection method) prepare_depth_explicit() (pygetm.open_boundaries.BoundaryCondition method) (pygetm.open_boundaries.Sponge method) prepare_save() (pygetm.output.OutputManager method) prepare_update_args() (pygetm.vertical_coordinates.PerGrid method) pres (pygetm.simulation.Simulation attribute) Prescribed (class in pygetm.ice) (class in pygetm.internal_pressure) pygetm module pygetm.airsea module pygetm.constants module pygetm.core module pygetm.debug module pygetm.density module pygetm.domain module pygetm.fabm module pygetm.ice module pygetm.input module pygetm.input.emodnet module pygetm.input.glodap module pygetm.input.gotm module pygetm.input.igotm module pygetm.input.tpxo module

pygetm.input.util module pygetm.input.util.convert_ts module pygetm.input.woa module pygetm.internal_pressure module pygetm.legacy module pygetm.momentum module pygetm.open_boundaries module pygetm.operators module pygetm.output module pygetm.output.memory module pygetm.output.netcdf module pygetm.output.operators module pygetm.parallel module pygetm.radiation module pygetm.rivers module pygetm.simulation module pygetm.subdiv module pygetm.tracer module pygetm.util module pygetm.util.compare_nc module pygetm.util.fill module pygetm.util.interpolate module pygetm.util.nctools module pygetm.vertical_coordinates module pygetm.vertical_mixing module

Q

qk (pygetm.momentum.Momentum attribute)

R

rad (pygetm.simulation.Simulation attribute) Radiation (class in pygetm.radiation) radiation (pygetm.simulation.Simulation attribute) rank (pygetm.parallel.HaloUpdater attribute) recv_data (pygetm.parallel.HaloUpdater attribute) recv_reqs (pygetm.parallel.HaloUpdater attribute) reduce() (pygetm.parallel.Tiling method) register() (pygetm.core.Array method) Regrid (class in pygetm.output.operators) regrid() (in module pygetm.input.glodap) Relaxation (class in pygetm.open_boundaries) relaxation (pygetm.open_boundaries.ArrayOpenBoundaries attribute) replace_calendar() (in module pygetm.input.util) report (pygetm.simulation.BaseSimulation attribute) report() (pygetm.parallel.Tiling method) report_domain_integrals() (pygetm.simulation.Simulation method) report_totals (pygetm.simulation.BaseSimulation attribute) request() (pygetm.output.operators.FieldCollection method) require() (pygetm.output.operators.FieldCollection method) require_set() (pygetm.core.Array method) rho (pygetm.simulation.Simulation attribute)

RIGHT (pygetm.parallel.Neighbor attribute) river_follow (pygetm.tracer.Tracer attribute) river_values (pygetm.tracer.Tracer attribute) rivers (pygetm.core.Grid attribute) (pygetm.simulation.Simulation attribute) (pygetm.tracer.Tracer attribute) RiverTracer (class in pygetm.rivers) root_has_global_values (pygetm.output.operators.Gather attribute) ROSATI_MIYAKODA (pygetm.airsea.ShortwaveMethod attribute) rotate() (pygetm.core.Grid method) (pygetm.domain.Domain method) rotation (pygetm.core.Grid property) (pygetm.domain.Domain property) Rotator (class in pygetm.core) rru (pygetm.momentum.Momentum attribute) rrv (pygetm.momentum.Momentum attribute) ru (pygetm.momentum.Momentum attribute) RunType (class in pygetm.constants) runtype (pygetm.momentum.Momentum attribute) (pygetm.simulation.Simulation attribute) rv (pygetm.momentum.Momentum attribute)

S

salt (pygetm.simulation.Simulation attribute) salt_sf (pygetm.simulation.Simulation attribute) save() (pygetm.output.File method) (pygetm.output.OutputManager method) save_now() (pygetm.output.File method) (pygetm.output.memory.MemoryFile method) (pygetm.output.netcdf.NetCDFFile method) saved (pygetm.core.Array attribute) scale_factor (pygetm.tracer.TracerTotal attribute) Scatter (class in pygetm.parallel) scatter() (pygetm.core.Array method) SECONDS (pygetm.output.TimeUnit attribute) select_nonempty_fields() (pygetm.output.File method) send_data (pygetm.parallel.HaloUpdater attribute) send_reqs (pygetm.parallel.HaloUpdater attribute) set() (pygetm.core.Array method) set_extent() (pygetm.parallel.Tiling method) set_fabm_standard_name() (pygetm.core.Array method) set_jerlov_type() (pygetm.radiation.TwoBand method) shape (pygetm.core.Array property) (pygetm.output.operators.Base attribute) ShchepetkinMcwilliams (class in pygetm.internal_pressure) shear_frequency() (pygetm.momentum.Momentum method) ShortwaveMethod (class in pygetm.airsea) Side (class in pygetm.open_boundaries) Sigma (class in pygetm.vertical_coordinates) Simulation (class in pygetm.simulation) size (pygetm.core.Array property) (pygetm.input.LazyArray property) Slice (class in pygetm.input) slicer (pygetm.open_boundaries.Relaxation attribute) slicespec2string() (in module pygetm.input) smooth() (pygetm.domain.Domain method) source (pygetm.tracer.Tracer attribute) source_scale (pygetm.tracer.Tracer attribute)

SOUTH (pygetm.open_boundaries.Side attribute) split_2d (pygetm.operators.Advection attribute) split_factor (pygetm.simulation.BaseSimulation attribute) SPLMAX13 (pygetm.operators.AdvectionScheme attribute) Sponge (class in pygetm.open_boundaries) SS (pygetm.momentum.Momentum attribute) sst (pygetm.simulation.Simulation attribute) ssu (pygetm.simulation.Simulation attribute) ssu_U (pygetm.simulation.Simulation attribute) ssv (pygetm.simulation.Simulation attribute) ssv_V (pygetm.simulation.Simulation attribute) start() (pygetm.fabm.FABM method) (pygetm.momentum.Momentum method) (pygetm.open_boundaries.LocalOpenBoundaryCollection method) (pygetm.output.File method) (pygetm.output.OutputManager method) (pygetm.parallel.BaseHaloUpdater method) (pygetm.parallel.HaloUpdater method) (pygetm.simulation.BaseSimulation method) (pygetm.tracer.TracerCollection method) start_now() (pygetm.output.File method) (pygetm.output.memory.MemoryFile method) (pygetm.output.netcdf.NetCDFFile method) state_variables (pygetm.fabm.FABM property) subdomain2rawslices() (pygetm.parallel.Tiling method) subdomain2slices() (pygetm.parallel.Tiling method) SUPERBEE (pygetm.operators.AdvectionScheme attribute) surface_flux (pygetm.tracer.Tracer attribute) SxA (pygetm.momentum.Momentum attribute) SxB (pygetm.momentum.Momentum attribute) SxD (pygetm.momentum.Momentum attribute) SxF (pygetm.momentum.Momentum attribute) SyA (pygetm.momentum.Momentum attribute) SyB (pygetm.momentum.Momentum attribute) SyD (pygetm.momentum.Momentum attribute) SyF (pygetm.momentum.Momentum attribute)

T

T (pygetm.simulation.Simulation attribute) target (pygetm.open_boundaries.Relaxation attribute) taub (pygetm.momentum.Momentum attribute) tausx (pygetm.simulation.Simulation attribute) tausxo (pygetm.simulation.Simulation attribute) tausy (pygetm.simulation.Simulation attribute) tausyo (pygetm.simulation.Simulation attribute) temp (pygetm.simulation.Simulation attribute) temp_sf (pygetm.simulation.Simulation attribute) temporal_interpolation() (in module pygetm.input) TemporalInterpolation (class in pygetm.input) test_scaling() (in module pygetm.parallel) test_scaling_command() (in module pygetm.parallel) Tiling (class in pygetm.parallel) tiling (pygetm.core.Grid attribute) (pygetm.simulation.BaseSimulation attribute) time (pygetm.input.GETMAccessor property) (pygetm.simulation.BaseSimulation attribute) time_varying (pygetm.output.operators.Base attribute) TimeAverage (class in pygetm.output.operators) timedelta (pygetm.simulation.BaseSimulation attribute) timestep (pygetm.simulation.BaseSimulation attribute) TIMESTEPS (pygetm.output.TimeUnit attribute) TimeUnit (class in pygetm.output) TimeVarying (class in pygetm.constants) to_cftime() (in module pygetm.simulation)

to_local_grid() (pygetm.open_boundaries.OpenBoundary method) (pygetm.rivers.GlobalRiver method) to_xarray() (pygetm.domain.Domain method) TOP (pygetm.parallel.Neighbor attribute) TOP_AND_BOTTOM (pygetm.parallel.Neighbor attribute) TOP_AND_RIGHT (pygetm.parallel.Neighbor attribute) TOPLEFT (pygetm.parallel.Neighbor attribute) TOPRIGHT (pygetm.parallel.Neighbor attribute) total_area (pygetm.simulation.Simulation attribute) total_volume_ref (pygetm.simulation.Simulation attribute) totals (pygetm.simulation.Simulation property) Tracer (class in pygetm.tracer) tracer_totals (pygetm.simulation.Simulation attribute) TracerCollection (class in pygetm.tracer) tracers (pygetm.simulation.Simulation attribute) TracerTotal (class in pygetm.tracer) Transpose (class in pygetm.input) transpose() (in module pygetm.input) TwoBand (class in pygetm.radiation) type (pygetm.open_boundaries.ArrayOpenBoundaries property) (pygetm.open_boundaries.ArrayOpenBoundary property) Type_1 (pygetm.radiation.Jerlov attribute) Type_I (pygetm.radiation.Jerlov attribute) Type_IA (pygetm.radiation.Jerlov attribute) Type_IB (pygetm.radiation.Jerlov attribute) Type_II (pygetm.radiation.Jerlov attribute) Type_III (pygetm.radiation.Jerlov attribute)

U

U (pygetm.momentum.Momentum attribute) (pygetm.simulation.Simulation attribute) u1 (pygetm.momentum.Momentum attribute) u_bot (pygetm.momentum.Momentum attribute) u_V (pygetm.momentum.Momentum attribute) uadv (pygetm.momentum.Momentum attribute) udev (pygetm.momentum.Momentum attribute) ufirst (pygetm.operators.Advection property) UFunc (class in pygetm.input) ugrid (pygetm.core.Grid attribute) Ui (pygetm.momentum.Momentum attribute) uk (pygetm.momentum.Momentum attribute) UnaryOperator (class in pygetm.input) units (pygetm.core.Array property) (pygetm.tracer.TracerTotal attribute) UnivariateTransform (class in pygetm.output.operators) UnivariateTransformWithData (class in pygetm.output.operators) UNRESOLVED (pygetm.constants.CellType attribute) Updatable (class in pygetm.output.operators) updatable (pygetm.output.operators.Base property) (pygetm.output.operators.TimeAverage property) (pygetm.output.operators.UnivariateTransform property) update() (pygetm.input.InputManager method) (pygetm.input.LazyArray method) (pygetm.input.Operator method) (pygetm.input.TemporalInterpolation method) (pygetm.input.tpxo.Data method) (pygetm.input.Wrap method) (pygetm.open_boundaries.ArrayOpenBoundaries method) (pygetm.output.operators.FieldCollection method) (pygetm.output.operators.TimeAverage method) (pygetm.vertical_coordinates.Base method) (pygetm.vertical_coordinates.FromTGrid method) (pygetm.vertical_coordinates.PerGrid method)

update_boundary() (pygetm.open_boundaries.Sponge static method) update_depth() (pygetm.simulation.Simulation method) update_depth_integrated_diagnostics() (pygetm.momentum.Momentum method) update_diagnostics() (pygetm.momentum.Momentum method) update_halos() (pygetm.core.Array method) update_humidity() (pygetm.airsea.FluxesFromMeteo method) update_longwave_radiation() (pygetm.airsea.FluxesFromMeteo method) update_shortwave_radiation() (pygetm.airsea.FluxesFromMeteo method) update_sources() (pygetm.fabm.FABM method) update_surface_pressure_gradient() (pygetm.simulation.Simulation method) update_T_grid() (pygetm.vertical_coordinates.Adaptive method) (pygetm.vertical_coordinates.FromTGrid method) update_totals() (pygetm.fabm.FABM method) update_transfer_coefficients() (pygetm.airsea.FluxesFromMeteo method) update_transport() (pygetm.open_boundaries.Flather static method) update_velocity() (pygetm.open_boundaries.Flather static method) updater (pygetm.output.operators.Base property) (pygetm.output.operators.TimeAverage property) (pygetm.output.operators.UnivariateTransform property) updaters (pygetm.open_boundaries.ArrayOpenBoundaries attribute) UPSTREAM (pygetm.operators.AdvectionScheme attribute) ustar2_bx (pygetm.momentum.Momentum attribute) ustar2_by (pygetm.momentum.Momentum attribute) ustar_b (pygetm.momentum.Momentum attribute) ustar_s (pygetm.simulation.Simulation attribute) uua (pygetm.momentum.Momentum attribute) uua3d (pygetm.momentum.Momentum attribute) uva (pygetm.momentum.Momentum attribute) uva3d (pygetm.momentum.Momentum attribute)

V

V (pygetm.momentum.Momentum attribute) (pygetm.simulation.Simulation attribute) v1 (pygetm.momentum.Momentum attribute) v_bot (pygetm.momentum.Momentum attribute) v_U (pygetm.momentum.Momentum attribute) vadv (pygetm.momentum.Momentum attribute) values (pygetm.core.Array attribute) (pygetm.open_boundaries.ArrayOpenBoundaries attribute) (pygetm.open_boundaries.ArrayOpenBoundary property) (pygetm.output.operators.Mask attribute) (pygetm.output.operators.UnivariateTransformWithData attribute) (pygetm.output.operators.WrappedArray attribute) vdev (pygetm.momentum.Momentum attribute) vertical_coordinates (pygetm.simulation.Simulation attribute)

vertical_interpolation() (in module pygetm.input) vertical_mixing (pygetm.simulation.Simulation attribute) vertical_velocity (pygetm.tracer.Tracer attribute) VerticalAdvection (class in pygetm.operators) VerticalDiffusion (class in pygetm.operators) VerticalInterpolation (class in pygetm.input) VerticalMixing (class in pygetm.vertical_mixing) VerticalPosition (class in pygetm.rivers) vgrid (pygetm.core.Grid attribute) Vi (pygetm.momentum.Momentum attribute) vk (pygetm.momentum.Momentum attribute) vua (pygetm.momentum.Momentum attribute) vua3d (pygetm.momentum.Momentum attribute) vva (pygetm.momentum.Momentum attribute) vva3d (pygetm.momentum.Momentum attribute)

W

weights (pygetm.open_boundaries.Relaxation attribute) WEST (pygetm.open_boundaries.Side attribute) where (pygetm.open_boundaries.Relaxation attribute)

Wrap (class in pygetm.input) wrap() (in module pygetm.input) WrappedArray (class in pygetm.output.operators) ww (pygetm.momentum.Momentum attribute)

X

x (pygetm.core.Grid property) (pygetm.domain.Domain property) (pygetm.open_boundaries.GlobalOpenBoundaryCollection property) (pygetm.output.memory.MemoryFile property)

X (pygetm.simulation.Simulation attribute) xarray (pygetm.core.Array property) xgrid (pygetm.core.Grid attribute) XY (pygetm.constants.CoordinateType attribute)

Y

y (pygetm.core.Grid property) (pygetm.domain.Domain property) (pygetm.open_boundaries.GlobalOpenBoundaryCollection property)

YEARS (pygetm.output.TimeUnit attribute)

Z

z (pygetm.core.Array property) (pygetm.core.Grid attribute) (pygetm.input.GETMAccessor property) (pygetm.output.operators.GridInfo attribute) z0 (pygetm.domain.Domain property) z0b (pygetm.core.Grid property) (pygetm.simulation.Simulation attribute) z0b_min (pygetm.core.Grid property) z0s (pygetm.simulation.Simulation attribute)

z_dim (pygetm.output.operators.InterpZ attribute) z_src (pygetm.output.operators.InterpZ attribute) z_tgt (pygetm.output.operators.InterpZ attribute) zc (pygetm.core.Grid property) ZeroGradient (class in pygetm.open_boundaries) zf (pygetm.core.Grid property) zin (pygetm.core.Grid attribute) zio (pygetm.core.Grid attribute) zo (pygetm.core.Grid attribute)